Friday, June 3, 2011

Week 5

This week has been a bit of a slog. I harvested the references for all publications regarding ascidians for the last 20 years. That was the easy part.

The hard part was sanitizing this data. I started doing it manually, but after about and hour your brain switches off and you make more mistakes than you are fixing.

So I wrote a quick and dirty program to sanitize the references. There were about 5 versions of it, each one sorting out another weird case.

The result is that it now takes about 10 minutes to process 100 references where it used to take about 2 hours.

Next week I have to write a program to import and merge these references into our ascidian database. Should be fun!

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